This is the codebase for Recycler, the new tool described in our manuscript: http://biorxiv.org/content/early/2016/04/05/029926, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir - View it on GitHub