95 Repositories
ncov
1353
auspice
300
augur
270
nextclade
233
nextstrain.org
96
seasonal-flu
51
mpox
46
ncov-ingest
36
nextclade_data
35
fauna
34
cli
27
avian-flu
25
docs.nextstrain.org
18
ncov-clades-schema
15
auspice.us
13
docker-base
12
phyloTree
11
zika-tutorial
10
zika
9
rsv
9
dengue
9
cov
8
.github
8
forecasts-ncov
7
zika-tutorial-nextflow
6
janus
6
readthedocs-cli
5
flu_frequencies
5
WNV
4
pathogen-repo-guide
4
nextstrain-walkthrough
4
translations
3
mers-beast-tutorial
3
measles
3
ebola
3
tb
2
rubella
2
react-sidebar
2
nextclade_dataset_template
2
narratives
2
mumps
2
mers
2
flora
2
conda
2
yellow-fever
1
wdl-debug
1
status
1
standard-RAxML
1
simplest-build
1
shared
1