100 Repositories
ncov
1359
auspice
305
augur
275
nextclade
251
nextstrain.org
96
seasonal-flu
58
mpox
50
nextclade_data
44
ncov-ingest
37
fauna
35
cli
28
avian-flu
27
docs.nextstrain.org
18
ncov-clades-schema
16
dengue
13
auspice.us
13
docker-base
12
rsv
11
phyloTree
11
zika-tutorial
10
zika
10
forecasts-ncov
9
.github
9
cov
8
zika-tutorial-nextflow
6
janus
6
WNV
5
readthedocs-cli
5
flu_frequencies
5
tb
4
pathogen-repo-guide
4
nextstrain-walkthrough
4
ebola
4
translations
3
narratives
3
mers-beast-tutorial
3
measles
3
yellow-fever
2
rubella
2
react-sidebar
2
norovirus
2
nipah
2
nextclade_dataset_template
2
mumps
2
mers
2
lassa
2
forecasts-viz
2
flora
2
conda
2
wdl-debug
1