73 Repositories
pySCENIC
481
SCENIC
437
scenicplus
207
SCENICprotocol
151
AUCell
146
cisTopic
135
SCope
69
pycisTopic
64
arboreto
56
create_cisTarget_databases
45
SCopeLoomR
41
RcisTarget
37
CREsted
32
GENIE3
30
ScoMAP
27
single_cell_toolkit
26
PUMATAC
25
nextcloud_share_url_downloader
24
popscle_helper_tools
20
GRNBoost
20
install_aspera_connect
19
scATAC-seq_benchmark
17
pycistarget
17
scenicplus_analyses
12
Nova-ST
9
Bravo_et_al_EyeAntennalDisc
8
singlecellRNA_melanoma_paper
7
PUMATAC_tutorial
7
scenic-nf
6
scatac_fragment_tools
6
LoomXpy
6
iRegulon
6
DeepMEL
6
DeepBrain
6
Bravo_et_al_Liver
6
MendelCraft
5
iterative_peak_filtering
4
SpatialNF
3
scforest
3
primescore
3
hydrop_data_analysis
3
ctxcore
3
webhdf5
2
SCopeLoomPy
2
mucistarget
2
fly_brain
2
ATAC-seq-analysis
2
regulatory_regions_delineation
1
Melanoma_MPRA_paper
1
DGRP2_dm3_to_dm6
1